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• Journal article
  van Thor JJ, Warren MM, Lincoln CN, Chollet M, Lemke HT, Fritz DM, Schmidt M, Tenboer J, Ren Z, Srajer V, Moffat K, Graber Tet al., 2014,

  Signal to noise considerations for single crystal femtosecond time resolved crystallography of the Photoactive Yellow Protein

  , FARADAY DISCUSSIONS, Vol: 171, Pages: 439-455, ISSN: 1359-6640
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  • Citations: 12
• Journal article
  Reeve B, Sanderson T, Ellis T, Freemont Pet al., 2014,

  How Synthetic Biology Will Reconsider Natural Bioluminescence and Its Applications

  , BIOLUMINESCENCE: FUNDAMENTALS AND APPLICATIONS IN BIOTECHNOLOGY, VOL 2, Vol: 145, Pages: 3-30, ISSN: 0724-6145
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  • Citations: 9
• Journal article
  Wang H, Shun M-C, Li X, Di Nunzio F, Hare S, Cherepanov P, Engelman Aet al., 2014,

  Efficient transduction of LEDGF/p75 mutant cells by complementary gain-of-function HIV-1 integrase mutant viruses

  , MOLECULAR THERAPY-METHODS & CLINICAL DEVELOPMENT, Vol: 1
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  • Citations: 24
• Journal article
  Sugiura M, Azami C, Koyama K, Rutherford AW, Rappaport F, Boussac Aet al., 2014,

  Modification of the pheophytin redox potential in Therrnosynechococcus elongatus Photosystem II with PsbA3 as D1

  , BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, Vol: 1837, Pages: 139-148, ISSN: 0005-2728
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  • Citations: 24
• Journal article
  Darbari VC, Lawton E, Lu D, Burrows PC, Wiesler S, Joly N, Zhang N, Zhang X, Buck Met al., 2014,

  Molecular basis of nucleotide-dependent substrate engagement and remodeling by an AAA plus activator

  , NUCLEIC ACIDS RESEARCH, Vol: 42, Pages: 9249-9261, ISSN: 0305-1048
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  • Citations: 1
• Journal article
  Mickleburgh I, Kafasla P, Cherny D, Llorian M, Curry S, Jackson RJ, Smith CWJet al., 2014,

  The organization of RNA contacts by PTB for regulation of FAS splicing

  , NUCLEIC ACIDS RESEARCH, Vol: 42, Pages: 8605-8620, ISSN: 0305-1048
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  • Citations: 11
• Journal article
  Liu B, Shadrin A, Sheppard C, Mekler V, Xu Y, Severinov K, Matthews S, Wigneshweraraj Set al., 2014,

  The sabotage of the bacterial transcription machinery by a small bacteriophage protein.

  , Bacteriophage, Vol: 4, ISSN: 2159-7073

  Many bacteriophages produce small proteins that specifically interfere with the bacterial host transcription machinery and thus contribute to the acquisition of the bacterial cell by the bacteriophage. We recently described how a small protein, called P7, produced by the Xp10 bacteriophage inhibits bacterial transcription initiation by causing the dissociation of the promoter specificity sigma factor subunit from the host RNA polymerase holoenzyme. In this addendum to the original publication, we present the highlights of that research.

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• Journal article
  Jones C, Filloux A, 2014,

  Gene Amplification and qRT-PCR

  , PSEUDOMONAS: METHODS AND PROTOCOLS, Vol: 1149, Pages: 457-468, ISSN: 1064-3745
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  • Citations: 1
• Journal article
  Hamilton ML, Franco E, Deák Z, Schlodder E, Vass I, Nixon PJet al., 2014,

  Investigating the photoprotective role of cytochrome b-559 in photosystem II in a mutant with altered ligation of the haem

  , Plant and Cell Physiology, Vol: 55, Pages: 1276-1285, ISSN: 0032-0781

  Despite many years of study, the physiological role of cytochrome b-559 (Cyt b-559) within the photosystem II (PSII) complex still remains unclear. Here we describe the analysis of a mutant of the green alga Chlamydomonas reinhardtii in which the His ligand to the haem, provided by the alpha subunit, has been replaced by a Cys residue. The mutant is unable to grow photoautotrophically but can assemble oxygen-evolving PSII supercomplexes to 15-20% of the levels found in the wild-type control. Haem is still detected in the isolated PSII supercomplexes but at sub-stoichiometric levels consistent with weaker binding to the mutated cytochrome. Analysis of PSII activity in cells indicates slowed electron transfer in the mutant between plastoquinones QA and QB. We show that PSII activity in the mutant is more sensitive to chronic photoinhibition than the WT control because of two effects: a faster rate of damage and an impaired PSII repair cycle at the level of synthesis and/or incorporation of D1 into PSII. We also demonstrate that Cyt b-559 plays a role during the critical stage of assembling the Mn 4CaO5 cluster. Overall we conclude that Cyt b-559 optimises electron transfer on the acceptor side of PSII and plays physiologically important roles in the assembly, repair and maintenance of the complex. © 2014 The Author 2014.

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  • Citations: 12
• Journal article
  Percy MG, Gruendling A, 2014,

  Lipoteichoic Acid Synthesis and Function in Gram-Positive Bacteria

  , ANNUAL REVIEW OF MICROBIOLOGY, VOL 68, Vol: 68, Pages: 81-100, ISSN: 0066-4227
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  • Citations: 223
• Journal article
  Barraud N, Moscoso JA, Ghigo J-M, Filloux Aet al., 2014,

  Methods for Studying Biofilm Dispersal in Pseudomonas aeruginosa

  , PSEUDOMONAS: METHODS AND PROTOCOLS, Vol: 1149, Pages: 643-651, ISSN: 1064-3745
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  • Citations: 25
• Journal article
  Muhl D, Filloux A, 2014,

  Site-Directed Mutagenesis and Gene Deletion Using Reverse Genetics

  , PSEUDOMONAS: METHODS AND PROTOCOLS, Vol: 1149, Pages: 521-539, ISSN: 1064-3745
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  • Citations: 11
• Journal article
  Filloux A, Ramos J-L, 2014,

  Preface. Pseudomonas methods and protocols.

  , Methods Mol Biol, Vol: 1149
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• Journal article
  Filloux A, 2013,

  Fit and resistant is a worst case scenario with bacterial pathogens

  , PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol: 110, Pages: 20360-20361, ISSN: 0027-8424
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  • Citations: 1
• Journal article
  Ha K, Buchan JG, Alvarado DM, Mccall K, Vydyanath A, Luther PK, Goldsmith MI, Dobbs MB, Gurnett CAet al., 2013,

  MYBPC1 mutations impair skeletal muscle function in zebrafish models of arthrogryposis

  , HUMAN MOLECULAR GENETICS, Vol: 22, Pages: 4967-4977, ISSN: 0964-6906
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  • Citations: 36
• Journal article
  Islam M, Gor J, Perkins SJ, Ishikawa Y, Baechinger HP, Hohenester Eet al., 2013,

  The Concave Face of Decorin Mediates Reversible Dimerization and Collagen Binding

  , JOURNAL OF BIOLOGICAL CHEMISTRY, Vol: 288, Pages: 35526-35533
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  • Citations: 25
• Journal article
  Jones C, Hachani A, Manoli E, Filloux Aet al., 2013,

  An rhs Gene Linked to the Second Type VI Secretion Cluster Is a Feature of the Pseudomonas aeruginosa Strain PA14

  , Journal of Bacteriology, Vol: 196, Pages: 800-810, ISSN: 1098-5530

  The type VI secretion system (T6SS) of Gram-negative bacteria has been involved in various processes, notably bacterial competition and eukaryotic cell subversion. Most Pseudomonas aeruginosa strains possess three T6SS gene clusters, but only the function of the first T6SS (H1-T6SS) has been clearly elucidated. It is involved in the secretion of three toxins (Tse1 to -3) that target bacterial competitors. In the case of the H2- and H3-T6SS, no clear function has been assigned, and only one effector has been associated with these systems. Yet the H2-T6SS was proposed to promote P. aeruginosa internalization in nonphagocytic epithelial cells. Although the H2-T6SS genetic organization is conserved across P. aeruginosa isolates, one feature is the presence of an additional transcriptional unit in the PA14 strain H2-T6SS cluster, which is divergent from the core H2-T6SS genes. A specific set of four genes encodes an Hcp protein (Hcp2), a VgrG protein (VgrG14), an Rhs element (PA14_43100 or RhsP2), and a protein with no homologies with previously characterized proteins (PA14_43090). In this study, we engineered a P. aeruginosa PA14 strain carrying an arabinose-inducible H2-T6SS on the chromosome. We showed that arabinose induction readily promotes assembly of the H2-T6SS, as seen by monitoring Hcp2 secretion. We further studied the secretion fate of VgrG14 and RhsP2, but these were not detectable in the extracellular medium. We finally investigated whether activation of the PA14 H2-T6SS gene cluster could influence phenotypic traits such as internalization in eukaryotic cells, and we reported noteworthy differences compared to strain PAO1, which may be accounted for by the described genetic differences.

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• Journal article
  Gupta SS, Maetzig T, Maertens GN, Sharif A, Rothe M, Weidner-Glunde M, Galla M, Schambach A, Cherepanov P, Schulz TFet al., 2013,

  Bromo- and Extraterminal Domain Chromatin Regulators Serve as Cofactors for Murine Leukemia Virus Integration

  , JOURNAL OF VIROLOGY, Vol: 87, Pages: 12721-12736, ISSN: 0022-538X
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  • Citations: 98
• Journal article
  Runti G, Ruiz MDCL, Stoilova T, Hussain R, Jennions M, Choudhury HG, Benincasa M, Gennaro R, Beis K, Scocchi Met al., 2013,

  Functional Characterization of SbmA, a Bacterial Inner Membrane Transporter Required for Importing the Antimicrobial Peptide Bac7(1-35)

  , JOURNAL OF BACTERIOLOGY, Vol: 195, Pages: 5343-5351, ISSN: 0021-9193
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  • Citations: 73
• Journal article
  Devi S, Williams D, 2013,

  Morphological and Compressional Mechanical Properties of Freeze-Dried Mannitol, Sucrose, and Trehalose Cakes

  , JOURNAL OF PHARMACEUTICAL SCIENCES, Vol: 102, Pages: 4246-4255, ISSN: 0022-3549
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  • Citations: 19
• Conference paper
  Carlsson E, Zhang M, Ding JL, Byrne Bet al., 2013,

  Gly601 residue of human SARM is critical for interaction with other TLR adaptor proteins

  , Annual Congress of the British-Society-for-Immunology, Publisher: WILEY-BLACKWELL, Pages: 180-180, ISSN: 0019-2805
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• Journal article
  Corbalan N, Runti G, Adler C, Covaceuszach S, Ford RC, Lamba D, Beis K, Scocchi M, Vincent PAet al., 2013,

  Functional and Structural Study of the Dimeric Inner Membrane Protein SbmA

  , JOURNAL OF BACTERIOLOGY, Vol: 195, Pages: 5352-5361, ISSN: 0021-9193
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  • Citations: 24
• Journal article
  Glassford SE, Byrne B, Kazarian SG, 2013,

  Recent applications of ATR FTIR spectroscopy and imaging to proteins

  , BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS, Vol: 1834, Pages: 2849-2858, ISSN: 1570-9639
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  • Citations: 164
• Journal article
  Muniz-Feliciano L, Van Grol J, Portillo J-AC, Liew L, Liu B, Carlin CR, Carruthers VB, Matthews S, Subauste CSet al., 2013,

  Toxoplasma gondii-Induced Activation of EGFR Prevents Autophagy Protein-Mediated Killing of the Parasite

  , PLOS PATHOGENS, Vol: 9, ISSN: 1553-7366
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  • Citations: 75
• Journal article
  Chae PS, Kruse AC, Gotfryd K, Rana RR, Cho KH, Rasmussen SGF, Bae HE, Chandra R, Gether U, Guan L, Kobilka BK, Loland CJ, Byrne B, Gellman SHet al., 2013,

  Novel Tripod Amphiphiles for Membrane Protein Analysis

  , CHEMISTRY-A EUROPEAN JOURNAL, Vol: 19, Pages: 15645-15651, ISSN: 0947-6539
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  • Citations: 39
• Journal article
  van Heel M, 2013,

  Finding trimeric HIV-1 envelope glycoproteins in random noise

  , PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol: 110, Pages: E4175-E4177, ISSN: 0027-8424
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  • Citations: 44
• Journal article
  Bebeacua C, Tremblay D, Farenc C, Chapot-Chartier M-P, Sadovskaya I, van Heel M, Veesler D, Moineau S, Cambillau Cet al., 2013,

  Structure, Adsorption to Host, and Infection Mechanism of Virulent Lactococcal Phage p2

  , JOURNAL OF VIROLOGY, Vol: 87, Pages: 12302-12312, ISSN: 0022-538X
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  • Citations: 63
• Journal article
  Harding CR, Mattheis C, Mousnier A, Oates CV, Hartland EL, Frankel G, Schroeder GNet al., 2013,

  LtpD Is a Novel Legionella pneumophila Effector That Binds Phosphatidylinositol 3-Phosphate and Inositol Monophosphatase IMPA1

  , INFECTION AND IMMUNITY, Vol: 81, Pages: 4261-4270, ISSN: 0019-9567
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  • Citations: 26
• Journal article
  Mercedes Palomino M, Allievi MC, Gruendling A, Sanchez-Rivas C, Ruzal SMet al., 2013,

  Osmotic stress adaptation in Lactobacillus casei BL23 leads to structural changes in the cell wall polymer lipoteichoic acid

  , MICROBIOLOGY-SGM, Vol: 159, Pages: 2416-2426, ISSN: 1350-0872
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  • Citations: 28
• Journal article
  Bialek W, Wen S, Michoux F, Beckova M, Komenda J, Murray JW, Nixon PJet al., 2013,

  Crystal structure of the Psb28 accessory factor of Thermosynechococcus elongatus photosystem II at 2.3 angstrom

  , PHOTOSYNTHESIS RESEARCH, Vol: 117, Pages: 375-383, ISSN: 0166-8595
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  • Citations: 8

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